No. words: 2543; after pruning: 2491


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      4

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 12.2 (1,1:592)  558  0.00 0.00 0.17  UCW030F_B09_BE444644As01P014G05P014G111F1_077.ab1        1   586 (60)  C UCW030R_B09_BE444644As01P014G05P014G111R1_077.ab1   (38)   592     8 *
Merge:(0)    0    0.0 10.3 (1,1:603)  570  0.00 0.00 0.33  UCW018F_E02_BE444644As01P014G05P014G111F1_008.ab1        1   605 (20)  C UCW018R_E02_BE444644As01P014G05P014G111R1_008.ab1   (39)   603     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       1        0
 7       1        0

Offset
  0       1 
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    2

Chimera merges: 


Contig 2:  292 nodes

 148 str. conn. components

Path
    1  C UCW030R_B09_BE444644As01P014G05P014G111R1_077.ab1   630 
  462    UCW030F_B09_BE444644As01P014G05P014G111F1_077.ab1   424 
Contig length: old 683, new 684

Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C UCW018R_E02_BE444644As01P014G05P014G111R1_008.ab1   642 
   70    UCW018F_E02_BE444644As01P014G05P014G111F1_008.ab1    31 
   78  C UCW018R_E02_BE444644As01P014G05P014G111R1_008.ab1   565 
  494    UCW018F_E02_BE444644As01P014G05P014G111F1_008.ab1   455 
Contig length: old 663, new 664

Contig length: old 684, new 684
New start: 0 

Contig length: old 664, new 664
New start: 0