No. words: 1266; after pruning: 1226


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:612)  567  0.00 0.16 0.65  UCW003F_D04_BE444644As02P002E04E101F1_030.ab1        1   615 (22)  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   (17)   612     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   629 
   49    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1    31 
   85  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   545 
   89    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1    71 
   97  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   533 
  101    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1    83 
  113  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   517 
  133    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   115 
  141  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   489 
  145    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   127 
  153  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   477 
  157    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   139 
  201  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   429 
  205    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   187 
  229  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   401 
  233    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   215 
  241  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   389 
  345    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   330 
  349  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   281 
  353    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   338 
  373  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   257 
  377    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   362 
  413  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   217 
  417    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   402 
  453  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   177 
  461    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   446 
  465  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   165 
  473    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   458 
  477  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   153 
  485    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   470 
  489  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1   141 
  505    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   490 
  533  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1    97 
  537    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   522 
  553  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1    77 
  573    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   558 
  581  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1    49 
  585    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   570 
  589  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1    41 
  597    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   582 
  612  C UCW003R_D04_BE444644As02P002E04E101R1_030.ab1    19 
  616    UCW003F_D04_BE444644As02P002E04E101F1_030.ab1   601 
Contig length: old 653, new 652

Contig length: old 652, new 652
New start: 0