No. words: 1253; after pruning: 1227


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   14    0.0 11.4 (1,1:589)  554  0.00 0.00 0.00  UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1        1   576 (49)  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1   (38)   590    15 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
14       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1   628 
   69    UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1    31 
   77  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1   552 
  117    UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1    79 
  129  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1   500 
  137    UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1    99 
  141  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1   488 
  165    UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1   127 
  201  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1   428 
  381    UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1   343 
  465  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1   164 
  473    UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1   435 
  593  C UCW018R_B01_BE444644Ld02P014G05P014G111R1_013.ab1    36 
  597    UCW018F_B01_BE444644Ld02P014G05P014G111F1_013.ab1   559 
Contig length: old 663, new 663

Contig length: old 663, new 663
New start: 0