No. words: 1267; after pruning: 1227


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:613)  572  0.00 0.16 0.49  UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1        1   615 (18)  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   (21)   613     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   634 
   33    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1    11 
   45  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   590 
   57    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1    35 
  101  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   534 
  105    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1    83 
  129  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   506 
  137    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   115 
  141  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   494 
  145    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   123 
  157  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   478 
  169    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   147 
  185  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   450 
  189    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   167 
  193  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   442 
  213    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   191 
  217  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   418 
  241    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   219 
  249  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   386 
  265    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   243 
  281  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   354 
  391    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   371 
  407  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   228 
  527    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   507 
  531  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1   104 
  543    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   523 
  551  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1    84 
  603    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   583 
  616  C UCW003R_F03_BE444644Ld06P002E04E101R1_027.ab1    20 
  620    UCW003F_F03_BE444644Ld06P002E04E101F1_027.ab1   600 
Contig length: old 653, new 653

Contig length: old 653, new 653
New start: 0