No. words: 1243; after pruning: 1217


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:574)  556  0.00 0.00 0.00  UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1        1   575 (55)  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   (38)   575     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   613 
   70    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1    32 
   86  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   528 
   90    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1    52 
  102  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   512 
  106    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1    68 
  114  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   500 
  118    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1    80 
  126  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   488 
  130    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1    92 
  146  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   468 
  150    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   112 
  154  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   460 
  166    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   128 
  182  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   432 
  194    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   156 
  198  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   416 
  494    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   456 
  498  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1   116 
  538    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   500 
  550  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1    64 
  558    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   520 
  578  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1    36 
  586    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   548 
  590  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1    24 
  598    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   560 
  606  C UCW018R_B02_BE444644Ld10P014G05P014G111R1_014.ab1     8 
  610    UCW018F_B02_BE444644Ld10P014G05P014G111F1_014.ab1   572 
Contig length: old 668, new 668

Contig length: old 668, new 668
New start: 0