No. words: 1116; after pruning: 1090


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 7.0 (1,1:513)  469  0.20 0.40 0.00  UCW039a_C04_BE444644Td03P001E10P022G071F1_028.ab1        1   502 (52)  C UCW040a_C04_BE444644Td03P001E10P022G071R1_028.ab1   (47)   515    12 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C UCW040a_C04_BE444644Td03P001E10P022G071R1_028.ab1   562 
  100    UCW039a_C04_BE444644Td03P001E10P022G071F1_028.ab1    51 
  112  C UCW040a_C04_BE444644Td03P001E10P022G071R1_028.ab1   451 
  544    UCW039a_C04_BE444644Td03P001E10P022G071F1_028.ab1   495 
Contig length: old 602, new 603

Contig length: old 603, new 603
New start: 0