No. words: 1458; after pruning: 1432


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.4 (1,1:1300)  134  2.55 0.64 0.64  UCW007F_B05_BE490237Ld02P002H06H121F1_045.ab1      709   865 (0)  C UCW007R_B05_BE490237Ld02P002H06H121R1_045.ab1   (0)   593   437 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  62 nodes

 33 str. conn. components

Path
    1    UCW007F_B05_BE490237Ld02P002H06H121F1_045.ab1     1 
  716  C UCW007R_B05_BE490237Ld02P002H06H121R1_045.ab1   586 
  724    UCW007F_B05_BE490237Ld02P002H06H121F1_045.ab1   724 
  728  C UCW007R_B05_BE490237Ld02P002H06H121R1_045.ab1   574 
  736    UCW007F_B05_BE490237Ld02P002H06H121F1_045.ab1   736 
  740  C UCW007R_B05_BE490237Ld02P002H06H121R1_045.ab1   562 
  748    UCW007F_B05_BE490237Ld02P002H06H121F1_045.ab1   748 
  756  C UCW007R_B05_BE490237Ld02P002H06H121R1_045.ab1   546 
  760    UCW007F_B05_BE490237Ld02P002H06H121F1_045.ab1   760 
  791  C UCW007R_B05_BE490237Ld02P002H06H121R1_045.ab1   511 
Contig length: old 1301, new 1301

Contig length: old 1301, new 1301
New start: 0