No. words: 1807; after pruning: 1781


Histogram of relative pair offsets, for read pairs with multiple alignments:
99    12

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:1144)  640  0.15 0.15 0.00  UCW007F_G10_BE494426At01P013H01H071F1_068.ab1      224   884 (0)  C UCW007R_G10_BE494426At01P013H01H071R1_068.ab1   (0)   923   262 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1    UCW007F_G10_BE494426At01P013H01H071F1_068.ab1     1 
  577  C UCW007R_G10_BE494426At01P013H01H071R1_068.ab1   570 
  585    UCW007F_G10_BE494426At01P013H01H071F1_068.ab1   585 
  605  C UCW007R_G10_BE494426At01P013H01H071R1_068.ab1   542 
Contig length: old 1145, new 1146

Contig length: old 1146, new 1146
New start: 0