No. words: 1855; after pruning: 1829


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 18.5 (1,1:905)  873  0.22 0.11 0.00  UCW007F_B09_BE494426Ld02P013H01H071F1_077.ab1        1   903 (29)  C UCW007R_B09_BE494426Ld02P013H01H071R1_077.ab1   (17)   906     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  448 nodes

 226 str. conn. components

Path
    1  C UCW007R_B09_BE494426Ld02P013H01H071R1_077.ab1   923 
   33    UCW007F_B09_BE494426Ld02P013H01H071F1_077.ab1    15 
  549  C UCW007R_B09_BE494426Ld02P013H01H071R1_077.ab1   375 
  917    UCW007F_B09_BE494426Ld02P013H01H071F1_077.ab1   899 
Contig length: old 949, new 950

Contig length: old 950, new 950
New start: 0 
S Change at: 23; seg lengths: entry 2, contig 2