No. words: 1821; after pruning: 1781


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.4 (1,1:918)  870  0.11 0.00 0.22  UCW007F_F09_BE494426Ld06P013H01H071F1_069.ab1       21   921 (1)  C UCW007R_F09_BE494426Ld06P013H01H071R1_069.ab1   (0)   899     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  442 nodes

 223 str. conn. components

Path
    1    UCW007F_F09_BE494426Ld06P013H01H071F1_069.ab1     1 
  651  C UCW007R_F09_BE494426Ld06P013H01H071R1_069.ab1   269 
Contig length: old 922, new 919

Contig length: old 919, new 919
New start: 0