No. words: 1756; after pruning: 1730


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:1120)  605  0.79 0.16 0.16  UCW007F_G12_BE495277At02P013A02A081F1_084.ab1      266   900 (0)  C UCW007R_G12_BE495277At02P013A02A081R1_084.ab1   (0)   856   222 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1    UCW007F_G12_BE495277At02P013A02A081F1_084.ab1     1 
  514  C UCW007R_G12_BE495277At02P013A02A081R1_084.ab1   608 
  526    UCW007F_G12_BE495277At02P013A02A081F1_084.ab1   526 
  534  C UCW007R_G12_BE495277At02P013A02A081R1_084.ab1   588 
  538    UCW007F_G12_BE495277At02P013A02A081F1_084.ab1   538 
  546  C UCW007R_G12_BE495277At02P013A02A081R1_084.ab1   576 
  550    UCW007F_G12_BE495277At02P013A02A081F1_084.ab1   550 
  558  C UCW007R_G12_BE495277At02P013A02A081R1_084.ab1   564 
  590    UCW007F_G12_BE495277At02P013A02A081F1_084.ab1   590 
  594  C UCW007R_G12_BE495277At02P013A02A081R1_084.ab1   528 
Contig length: old 1121, new 1121

Contig length: old 1121, new 1121
New start: 0