No. words: 1656; after pruning: 1630


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:1155)  492  0.20 0.00 0.00  UCW007F_B11_BE495277Ld02P013A02A081F1_093.ab1      320   819 (0)  C UCW007R_B11_BE495277Ld02P013A02A081R1_093.ab1   (0)   837   338 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1    UCW007F_B11_BE495277Ld02P013A02A081F1_093.ab1     1 
  463  C UCW007R_B11_BE495277Ld02P013A02A081R1_093.ab1   694 
  467    UCW007F_B11_BE495277Ld02P013A02A081F1_093.ab1   467 
  475  C UCW007R_B11_BE495277Ld02P013A02A081R1_093.ab1   682 
  479    UCW007F_B11_BE495277Ld02P013A02A081F1_093.ab1   479 
  531  C UCW007R_B11_BE495277Ld02P013A02A081R1_093.ab1   626 
  543    UCW007F_B11_BE495277Ld02P013A02A081F1_093.ab1   543 
  547  C UCW007R_B11_BE495277Ld02P013A02A081R1_093.ab1   610 
Contig length: old 1156, new 1156

Contig length: old 1156, new 1156
New start: 0