No. words: 1687; after pruning: 1647


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:1031)  638  0.15 0.31 0.00  UCW007F_A12_BE495277Ld08P013A02A081F1_096.ab1      249   902 (0)  C UCW007R_A12_BE495277Ld08P013A02A081R1_096.ab1   (0)   785   130 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1    UCW007F_A12_BE495277Ld08P013A02A081F1_096.ab1     1 
  416  C UCW007R_A12_BE495277Ld08P013A02A081R1_096.ab1   618 
  428    UCW007F_A12_BE495277Ld08P013A02A081F1_096.ab1   428 
  436  C UCW007R_A12_BE495277Ld08P013A02A081R1_096.ab1   598 
  440    UCW007F_A12_BE495277Ld08P013A02A081F1_096.ab1   440 
  456  C UCW007R_A12_BE495277Ld08P013A02A081R1_096.ab1   578 
  464    UCW007F_A12_BE495277Ld08P013A02A081F1_096.ab1   464 
  476  C UCW007R_A12_BE495277Ld08P013A02A081R1_096.ab1   558 
  484    UCW007F_A12_BE495277Ld08P013A02A081F1_096.ab1   484 
  492  C UCW007R_A12_BE495277Ld08P013A02A081R1_096.ab1   542 
Contig length: old 1032, new 1033

Contig length: old 1033, new 1033
New start: 0