No. words: 1530; after pruning: 1504


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.3 (1,1:1043)  454  0.82 0.41 0.21  UCW059_C12_BE495277Sn28P033C04P013A021R1_092.ab1      319   803 (0)  C UCW060_C12_BE495277Sn28P033C04P013A021F1_092.ab1   (0)   727   242 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1    UCW059_C12_BE495277Sn28P033C04P013A021R1_092.ab1     1 
  629  C UCW060_C12_BE495277Sn28P033C04P013A021F1_092.ab1   416 
  657    UCW059_C12_BE495277Sn28P033C04P013A021R1_092.ab1   657 
  665  C UCW060_C12_BE495277Sn28P033C04P013A021F1_092.ab1   380 
Contig length: old 1044, new 1044

Contig length: old 1044, new 1044
New start: 0