No. words: 1613; after pruning: 1587


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.0 (1,1:1078)  519  0.56 0.00 0.00  UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1      359   892 (0)  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   (0)   721   188 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  260 nodes

 132 str. conn. components

Path
    1    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1     1 
  660  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   420 
  664    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   664 
  668  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   412 
  672    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   672 
  688  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   392 
  696    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   696 
  700  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   380 
  720    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   720 
  724  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   356 
  732    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   732 
  748  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   332 
  776    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   776 
  780  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   300 
  844    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   844 
  848  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   232 
  852    UCW061_G05_BE495277Ta15P033B04P013A021R1_035.ab1   852 
  856  C UCW062_G05_BE495277Ta15P033B04P013A021F1_035.ab1   224 
Contig length: old 1079, new 1079

Contig length: old 1079, new 1079
New start: 0