No. words: 1289; after pruning: 1263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:1020)  263  0.00 0.00 0.00  UCW059_H10_BE495277Ta18P033C04P013A021R1_066.ab1      553   820 (0)  C UCW060_H10_BE495277Ta18P033C04P013A021F1_066.ab1   (0)   469   202 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1    UCW059_H10_BE495277Ta18P033C04P013A021R1_066.ab1     1 
  670  C UCW060_H10_BE495277Ta18P033C04P013A021F1_066.ab1   352 
  674    UCW059_H10_BE495277Ta18P033C04P013A021R1_066.ab1   674 
  678  C UCW060_H10_BE495277Ta18P033C04P013A021F1_066.ab1   344 
  698    UCW059_H10_BE495277Ta18P033C04P013A021R1_066.ab1   698 
  702  C UCW060_H10_BE495277Ta18P033C04P013A021F1_066.ab1   320 
  714    UCW059_H10_BE495277Ta18P033C04P013A021R1_066.ab1   714 
  718  C UCW060_H10_BE495277Ta18P033C04P013A021F1_066.ab1   304 
  746    UCW059_H10_BE495277Ta18P033C04P013A021R1_066.ab1   746 
  750  C UCW060_H10_BE495277Ta18P033C04P013A021F1_066.ab1   272 
Contig length: old 1021, new 1021

Contig length: old 1021, new 1021
New start: 0