No. words: 1512; after pruning: 1486 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 7.7 (1,1:1086) 409 0.94 0.00 0.00 UCW061_E04_BE495277Td05P033B04P013A021R1_024.ab1 475 899 (0) C UCW062_E04_BE495277Td05P033B04P013A021F1_024.ab1 (0) 613 189 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 204 nodes 104 str. conn. components Path 1 UCW061_E04_BE495277Td05P033B04P013A021R1_024.ab1 1 763 C UCW062_E04_BE495277Td05P033B04P013A021F1_024.ab1 325 777 UCW061_E04_BE495277Td05P033B04P013A021R1_024.ab1 777 789 C UCW062_E04_BE495277Td05P033B04P013A021F1_024.ab1 299 793 UCW061_E04_BE495277Td05P033B04P013A021R1_024.ab1 793 797 C UCW062_E04_BE495277Td05P033B04P013A021F1_024.ab1 291 805 UCW061_E04_BE495277Td05P033B04P013A021R1_024.ab1 805 809 C UCW062_E04_BE495277Td05P033B04P013A021F1_024.ab1 279 813 UCW061_E04_BE495277Td05P033B04P013A021R1_024.ab1 813 817 C UCW062_E04_BE495277Td05P033B04P013A021F1_024.ab1 271 861 UCW061_E04_BE495277Td05P033B04P013A021R1_024.ab1 861 865 C UCW062_E04_BE495277Td05P033B04P013A021F1_024.ab1 223 Contig length: old 1087, new 1087 Contig length: old 1087, new 1087 New start: 0 S Change at: 773; seg lengths: entry 1, contig 1