No. words: 1493; after pruning: 1467


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:746)  690  0.68 0.14 0.00  UCW005F_E06_BE497368As02P002H03H091F1_039.ab1       11   747 (8)  C UCW005R_E06_BE497368As02P002H03H091R1_039.ab1   (0)   738     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1    UCW005F_E06_BE497368As02P002H03H091F1_039.ab1     1 
  628  C UCW005R_E06_BE497368As02P002H03H091R1_039.ab1   120 
  737    UCW005F_E06_BE497368As02P002H03H091F1_039.ab1   737 
Contig length: old 755, new 755

Contig length: old 755, new 755
New start: 0