No. words: 1439; after pruning: 1413


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:685)  653  0.00 0.00 0.00  UCW005F_B06_BE497368At02P002H03H091F1_045.ab1        1   686 (32)  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   (35)   686     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   721 
   47    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1    12 
   51  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   671 
   55    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1    20 
  139  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   583 
  143    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   108 
  147  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   575 
  151    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   116 
  255  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   467 
  271    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   236 
  275  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   447 
  287    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   252 
  319  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   403 
  339    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   304 
  347  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   375 
  359    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   324 
  427  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   295 
  435    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   400 
  443  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   279 
  451    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   416 
  463  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   259 
  471    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   436 
  475  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   247 
  495    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   460 
  507  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   215 
  559    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   524 
  563  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   159 
  567    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   532 
  575  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   147 
  583    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   548 
  587  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   135 
  595    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   560 
  603  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1   119 
  703    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   668 
  707  C UCW005R_B06_BE497368At02P002H03H091R1_045.ab1    15 
  715    UCW005F_B06_BE497368At02P002H03H091F1_045.ab1   680 
Contig length: old 753, new 753

Contig length: old 753, new 753
New start: 0