No. words: 1415; after pruning: 1389


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:742)  636  0.15 0.15 0.00  UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1        5   675 (0)  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   (0)   740    69 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1     1 
    8  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   737 
   43    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1    42 
   63  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   682 
   67    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1    66 
   91  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   654 
   95    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1    94 
  147  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   598 
  151    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   150 
  311  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   434 
  315    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   314 
  327  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   418 
  335    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   334 
  395  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   350 
  399    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   398 
  459  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   286 
  463    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   462 
  491  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   254 
  495    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   494 
  507  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   238 
  515    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   514 
  519  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   226 
  531    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   530 
  551  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   194 
  571    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   570 
  579  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   166 
  599    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   598 
  603  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   142 
  631    UCW005F_A05_BE497368Ld01P002H03H091F1_033.ab1   630 
  639  C UCW005R_A05_BE497368Ld01P002H03H091R1_033.ab1   106 
Contig length: old 743, new 744

Contig length: old 744, new 744
New start: 0