No. words: 1468; after pruning: 1442


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.3 (1,1:728)  691  0.00 0.14 0.14  UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1        5   730 (12)  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   (0)   726     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1     1 
   12  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   719 
   51    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1    50 
   83  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   648 
   87    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1    86 
   91  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   640 
   95    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1    94 
  135  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   596 
  139    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   138 
  203  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   528 
  215    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   214 
  279  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   452 
  283    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   282 
  327  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   404 
  331    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   330 
  343  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   388 
  355    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   354 
  411  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   320 
  427    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   426 
  443  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   288 
  447    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   446 
  459  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   272 
  463    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   462 
  487  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   244 
  499    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   498 
  503  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   228 
  527    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   526 
  531  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   200 
  543    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   542 
  547  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   184 
  559    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   558 
  567  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   164 
  571    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   570 
  579  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   152 
  587    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   586 
  591  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   140 
  595    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   594 
  607  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   124 
  615    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   614 
  623  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1   108 
  631    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   630 
  635  C UCW005R_F05_BE497368Ld06P002H03H091R1_043.ab1    96 
  715    UCW005F_F05_BE497368Ld06P002H03H091F1_043.ab1   714 
Contig length: old 742, new 743

Contig length: old 743, new 743
New start: 0