No. words: 836; after pruning: 810


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.4 (1,1:506)  256  0.00 0.00 0.00  UCW047_D05_BE497368Ta12P002H09P022F111F1_041.ab1        2   266 (0)  C UCW048_D05_BE497368Ta12P002H09P022F111R1_041.ab1   (64)   506   242 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C UCW048_D05_BE497368Ta12P002H09P022F111R1_041.ab1   570 
Contig length: old 570, new 570

Contig length: old 570, new 570
New start: 0