No. words: 1139; after pruning: 1113


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.6 (1,1:514)  489  0.19 0.00 0.19  UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1        1   513 (55)  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   (57)   514     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   571 
   71    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1    14 
   75  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   497 
  198    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   141 
  202  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   370 
  226    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   169 
  230  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   342 
  402    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   345 
  406  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   166 
  422    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   365 
  426  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   146 
  430    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   373 
  446  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   126 
  450    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   393 
  454  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   118 
  462    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   405 
  466  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1   106 
  470    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   413 
  482  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1    90 
  486    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   429 
  494  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1    78 
  498    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   441 
  510  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1    62 
  526    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   469 
  534  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1    38 
  538    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   481 
  560  C UCW048_E05_BE497368Ta13P002H09P022F111R1_039.ab1    13 
  564    UCW047_E05_BE497368Ta13P002H09P022F111F1_039.ab1   507 
Contig length: old 624, new 625

Contig length: old 625, new 625
New start: 0