No. words: 982; after pruning: 956


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 6.2 (1,1:542)  401  0.00 0.69 0.00  UCW049_D10_BE497368Ta14P002G09P022G111F1_074.ab1        6   437 (0)  C UCW050_D10_BE497368Ta14P002G09P022G111R1_074.ab1   (5)   540   106 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  212 nodes

 108 str. conn. components

Path
    1    UCW049_D10_BE497368Ta14P002G09P022G111F1_074.ab1     1 
   18  C UCW050_D10_BE497368Ta14P002G09P022G111R1_074.ab1   527 
   30    UCW049_D10_BE497368Ta14P002G09P022G111F1_074.ab1    28 
  106  C UCW050_D10_BE497368Ta14P002G09P022G111R1_074.ab1   439 
  110    UCW049_D10_BE497368Ta14P002G09P022G111F1_074.ab1   108 
  162  C UCW050_D10_BE497368Ta14P002G09P022G111R1_074.ab1   383 
  166    UCW049_D10_BE497368Ta14P002G09P022G111F1_074.ab1   164 
  214  C UCW050_D10_BE497368Ta14P002G09P022G111R1_074.ab1   331 
  218    UCW049_D10_BE497368Ta14P002G09P022G111F1_074.ab1   216 
  242  C UCW050_D10_BE497368Ta14P002G09P022G111R1_074.ab1   303 
Contig length: old 545, new 544

Contig length: old 544, new 544
New start: 0