No. words: 872; after pruning: 846


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.7 (1,1:507)  291  0.00 0.00 0.33  UCW047_A06_BE497368Ta17P002H09P022F111F1_048.ab1      205   509 (59)  C UCW048_A06_BE497368Ta17P002H09P022F111R1_048.ab1   (0)   304     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  150 nodes

 77 str. conn. components

Path
    1    UCW047_A06_BE497368Ta17P002H09P022F111F1_048.ab1     1 
  456  C UCW048_A06_BE497368Ta17P002H09P022F111R1_048.ab1    53 
  460    UCW047_A06_BE497368Ta17P002H09P022F111F1_048.ab1   460 
  476  C UCW048_A06_BE497368Ta17P002H09P022F111R1_048.ab1    33 
  480    UCW047_A06_BE497368Ta17P002H09P022F111F1_048.ab1   480 
Contig length: old 568, new 568

Contig length: old 568, new 568
New start: 0