No. words: 946; after pruning: 920


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 5.9 (1,1:511)  352  1.06 0.26 0.00  UCW047_B06_BE497368Ta18P002H09P022F111F1_046.ab1        3   381 (0)  C UCW048_B06_BE497368Ta18P002H09P022F111R1_046.ab1   (54)   511   132 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  176 nodes

 90 str. conn. components

Path
    1  C UCW048_B06_BE497368Ta18P002H09P022F111R1_046.ab1   565 
Contig length: old 565, new 565

Contig length: old 565, new 565
New start: 0