No. words: 1132; after pruning: 1106


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.6 (1,1:507)  483  0.00 0.20 0.20  UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1        1   508 (59)  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   (57)   508     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   565 
   67    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1    10 
   75  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   491 
   89    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1    31 
   93  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   473 
  105    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1    47 
  113  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   453 
  141    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1    83 
  153  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   413 
  161    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   103 
  165  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   401 
  393    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   335 
  401  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   165 
  405    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   347 
  425  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   141 
  429    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   371 
  437  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   129 
  449    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   391 
  453  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1   113 
  461    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   403 
  481  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1    85 
  485    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   427 
  489  C UCW048_G06_BE497368Ta23P002H09P022F111R1_036.ab1    77 
  525    UCW047_G06_BE497368Ta23P002H09P022F111F1_036.ab1   467 
Contig length: old 624, new 625

Contig length: old 625, new 625
New start: 0