No. words: 1564; after pruning: 1510


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:839)  704  0.28 0.00 0.00  UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1       24   747 (0)  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   (0)   817    94 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  360 nodes

 182 str. conn. components

Path
    1    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1     1 
  320  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   521 
  332    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   332 
  340  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   501 
  352    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   352 
  356  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   485 
  364    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   364 
  388  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   453 
  400    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   400 
  404  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   437 
  420    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   420 
  424  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   417 
  444    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   444 
  448  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   393 
  456    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   456 
  464  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   377 
  600    UCW006F_D05_BE497820Ld04P002F03F091F1_042.ab1   600 
  604  C UCW006R_D05_BE497820Ld04P002F03F091R1_042.ab1   237 
Contig length: old 840, new 840

Contig length: old 840, new 840
New start: 0