No. words: 1673; after pruning: 1633


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.4 (1,1:882)  771  0.25 0.00 0.00  UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1       24   813 (0)  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   (0)   860    71 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  390 nodes

 197 str. conn. components

Path
    1    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1     1 
  320  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   564 
  324    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   324 
  328  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   556 
  332    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   332 
  348  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   536 
  352    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   352 
  356  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   528 
  368    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   368 
  404  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   480 
  412    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   412 
  420  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   464 
  424    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   424 
  428  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   456 
  456    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   456 
  460  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   424 
  600    UCW006F_B06_BE497820Ld10P002F03F091F1_045.ab1   600 
  604  C UCW006R_B06_BE497820Ld10P002F03F091R1_045.ab1   280 
Contig length: old 883, new 883

Contig length: old 883, new 883
New start: 0