No. words: 1725; after pruning: 1699


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 18.2 (1,1:823)  807  0.00 0.00 0.12  UCW055_C12_BE497820Sn28P033E01P002F031R1_092.ab1        1   824 (35)  C UCW056_C12_BE497820Sn28P033E01P002F031F1_092.ab1   (43)   823     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  412 nodes

 208 str. conn. components

Path
    1  C UCW056_C12_BE497820Sn28P033E01P002F031F1_092.ab1   866 
   47    UCW055_C12_BE497820Sn28P033E01P002F031R1_092.ab1     4 
  183  C UCW056_C12_BE497820Sn28P033E01P002F031F1_092.ab1   684 
  187    UCW055_C12_BE497820Sn28P033E01P002F031R1_092.ab1   144 
  251  C UCW056_C12_BE497820Sn28P033E01P002F031F1_092.ab1   616 
  463    UCW055_C12_BE497820Sn28P033E01P002F031R1_092.ab1   420 
  475  C UCW056_C12_BE497820Sn28P033E01P002F031F1_092.ab1   392 
  779    UCW055_C12_BE497820Sn28P033E01P002F031R1_092.ab1   736 
  783  C UCW056_C12_BE497820Sn28P033E01P002F031F1_092.ab1    84 
  851    UCW055_C12_BE497820Sn28P033E01P002F031R1_092.ab1   808 
Contig length: old 901, new 902

Contig length: old 902, new 902
New start: 0