No. words: 1721; after pruning: 1681


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:829)  808  0.12 0.00 0.24  UCW055_D10_BE497820Ta14P033E01P002F031R1_074.ab1        1   831 (26)  C UCW056_D10_BE497820Ta14P033E01P002F031F1_074.ab1   (35)   829     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  408 nodes

 206 str. conn. components

Path
    1  C UCW056_D10_BE497820Ta14P033E01P002F031F1_074.ab1   864 
   43    UCW055_D10_BE497820Ta14P033E01P002F031R1_074.ab1     8 
   47  C UCW056_D10_BE497820Ta14P033E01P002F031F1_074.ab1   818 
   59    UCW055_D10_BE497820Ta14P033E01P002F031R1_074.ab1    24 
  167  C UCW056_D10_BE497820Ta14P033E01P002F031F1_074.ab1   698 
  171    UCW055_D10_BE497820Ta14P033E01P002F031R1_074.ab1   136 
  255  C UCW056_D10_BE497820Ta14P033E01P002F031F1_074.ab1   610 
  619    UCW055_D10_BE497820Ta14P033E01P002F031R1_074.ab1   584 
  631  C UCW056_D10_BE497820Ta14P033E01P002F031F1_074.ab1   234 
  841    UCW055_D10_BE497820Ta14P033E01P002F031R1_074.ab1   806 
  849  C UCW056_D10_BE497820Ta14P033E01P002F031F1_074.ab1    17 
  853    UCW055_D10_BE497820Ta14P033E01P002F031R1_074.ab1   818 
Contig length: old 891, new 892

Contig length: old 892, new 892
New start: 0