No. words: 1318; after pruning: 1292


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:603)  593  0.00 0.00 0.00  UCW007F_G02_BE498768At01P002B01B071F1_004.ab1        1   604 (64)  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1   (46)   604     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1   650 
   62    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1    16 
   70  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1   581 
   74    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1    28 
   82  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1   569 
   86    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1    40 
   98  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1   553 
  102    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1    56 
  106  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1   545 
  502    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1   456 
  506  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1   145 
  546    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1   500 
  606  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1    45 
  618    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1   572 
  622  C UCW007R_G02_BE498768At01P002B01B071R1_004.ab1    29 
  642    UCW007F_G02_BE498768At01P002B01B071F1_004.ab1   596 
Contig length: old 714, new 714

Contig length: old 714, new 714
New start: 0