No. words: 1724; after pruning: 1684


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.2 (1,1:823)  797  0.12 0.36 0.00  UCW018F_B11_BE498768Ld02P014A06P014A121F1_093.ab1        1   823 (41)  C UCW018R_B11_BE498768Ld02P014A06P014A121R1_093.ab1   (34)   826     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  402 nodes

 203 str. conn. components

Path
    1  C UCW018R_B11_BE498768Ld02P014A06P014A121R1_093.ab1   860 
   53    UCW018F_B11_BE498768Ld02P014A06P014A121F1_093.ab1    17 
  448  C UCW018R_B11_BE498768Ld02P014A06P014A121R1_093.ab1   412 
  841    UCW018F_B11_BE498768Ld02P014A06P014A121F1_093.ab1   805 
Contig length: old 900, new 900

Contig length: old 900, new 900
New start: 0