No. words: 1630; after pruning: 1562


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.2 (1,1:821)  746  0.39 0.39 0.00  UCW018F_D11_BE498768Ld04P014A06P014A121F1_089.ab1        1   774 (0)  C UCW018R_D11_BE498768Ld04P014A06P014A121R1_089.ab1   (32)   824    48 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1  C UCW018R_D11_BE498768Ld04P014A06P014A121R1_089.ab1   856 
   51    UCW018F_D11_BE498768Ld04P014A06P014A121F1_089.ab1    17 
  526  C UCW018R_D11_BE498768Ld04P014A06P014A121R1_089.ab1   330 
Contig length: old 856, new 855

Contig length: old 855, new 855
New start: 0