No. words: 1289; after pruning: 1263


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:604)  583  0.00 0.33 0.00  UCW007F_F01_BE498768Ld06P002B01B071F1_005.ab1        1   604 (49)  C UCW007R_F01_BE498768Ld06P002B01B071R1_005.ab1   (30)   606     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C UCW007R_F01_BE498768Ld06P002B01B071R1_005.ab1   636 
   85    UCW007F_F01_BE498768Ld06P002B01B071F1_005.ab1    53 
  105  C UCW007R_F01_BE498768Ld06P002B01B071R1_005.ab1   532 
  585    UCW007F_F01_BE498768Ld06P002B01B071F1_005.ab1   553 
Contig length: old 684, new 685

Contig length: old 685, new 685
New start: 0