No. words: 1277; after pruning: 1237


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.1 (1,1:613)  584  0.16 0.33 0.16  UCW007F_H01_BE498768Ld08P002B01B071F1_001.ab1        1   611 (24)  C UCW007R_H01_BE498768Ld08P002B01B071R1_001.ab1   (27)   615     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C UCW007R_H01_BE498768Ld08P002B01B071R1_001.ab1   642 
   52    UCW007F_H01_BE498768Ld08P002B01B071F1_001.ab1    23 
  526  C UCW007R_H01_BE498768Ld08P002B01B071R1_001.ab1   117 
  626    UCW007F_H01_BE498768Ld08P002B01B071F1_001.ab1   597 
Contig length: old 663, new 664

Contig length: old 664, new 664
New start: 0