No. words: 1222; after pruning: 1196


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.6 (1,1:571)  549  0.00 0.00 0.18  UCW061_F11_BE498768Sn24P033F04P002B071F1_085.ab1        1   568 (42)  C UCW062_F11_BE498768Sn24P033F04P002B071R1_085.ab1   (41)   571     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C UCW062_F11_BE498768Sn24P033F04P002B071R1_085.ab1   612 
  453    UCW061_F11_BE498768Sn24P033F04P002B071F1_085.ab1   412 
Contig length: old 650, new 651

Contig length: old 651, new 651
New start: 0