No. words: 1269; after pruning: 1243


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 10.6 (1,1:607)  575  0.00 0.00 0.33  UCW061_G11_BE498768Sn25P033F04P002B071F1_083.ab1        9   607 (25)  C UCW062_G11_BE498768Sn25P033F04P002B071R1_083.ab1   (38)   599     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C UCW062_G11_BE498768Sn25P033F04P002B071R1_083.ab1   637 
  542    UCW061_G11_BE498768Sn25P033F04P002B071F1_083.ab1   512 
Contig length: old 661, new 662

Contig length: old 662, new 662
New start: 0