No. words: 1240; after pruning: 1214


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.5 (1,1:590)  558  0.17 0.00 0.34  UCW061_G10_BE498768Ta17P033F04P002B071F1_068.ab1        7   591 (27)  C UCW062_G10_BE498768Ta17P033F04P002B071R1_068.ab1   (38)   584     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  286 nodes

 145 str. conn. components

Path
    1  C UCW062_G10_BE498768Ta17P033F04P002B071R1_068.ab1   622 
   66    UCW061_G10_BE498768Ta17P033F04P002B071F1_068.ab1    34 
   70  C UCW062_G10_BE498768Ta17P033F04P002B071R1_068.ab1   553 
  450    UCW061_G10_BE498768Ta17P033F04P002B071F1_068.ab1   418 
Contig length: old 649, new 650

Contig length: old 650, new 650
New start: 0