No. words: 1226; after pruning: 1200


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.0 (1,1:577)  550  0.00 0.18 0.00  UCW061_H10_BE498768Ta18P033F04P002B071F1_066.ab1        8   575 (41)  C UCW062_H10_BE498768Ta18P033F04P002B071R1_066.ab1   (38)   572     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C UCW062_H10_BE498768Ta18P033F04P002B071R1_066.ab1   610 
  527    UCW061_H10_BE498768Ta18P033F04P002B071F1_066.ab1   495 
Contig length: old 648, new 648

Contig length: old 648, new 648
New start: 0