No. words: 959; after pruning: 933


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 5.1 (1,1:580)  315  0.89 0.30 0.00  UCW061_D11_BE498768Ta22P033F04P002B071F1_089.ab1      241   577 (39)  C UCW062_D11_BE498768Ta22P033F04P002B071R1_089.ab1   (1)   342     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  160 nodes

 82 str. conn. components

Path
    1    UCW061_D11_BE498768Ta22P033F04P002B071F1_089.ab1     1 
Contig length: old 616, new 616

Contig length: old 616, new 616
New start: 0