No. words: 1232; after pruning: 1206


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 11.2 (1,1:582)  551  0.00 0.00 0.35  UCW061_E11_BE498768Ta23P033F04P002B071F1_087.ab1       10   584 (35)  C UCW062_E11_BE498768Ta23P033F04P002B071R1_087.ab1   (40)   573     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C UCW062_E11_BE498768Ta23P033F04P002B071R1_087.ab1   613 
   76    UCW061_E11_BE498768Ta23P033F04P002B071F1_087.ab1    45 
  116  C UCW062_E11_BE498768Ta23P033F04P002B071R1_087.ab1   498 
  452    UCW061_E11_BE498768Ta23P033F04P002B071F1_087.ab1   421 
Contig length: old 649, new 650

Contig length: old 650, new 650
New start: 0