No. words: 1523; after pruning: 1497


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.1 (1,1:1425)   90  0.00 0.00 0.00  UCW039a_D07_BE498878Td04P001A10P022H071F1_057.ab1      591   687 (0)  C UCW040a_D07_BE498878Td04P001A10P022H071R1_057.ab1   (0)   836   740 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  46 nodes

 25 str. conn. components

Path
    1    UCW039a_D07_BE498878Td04P001A10P022H071F1_057.ab1     1 
  598  C UCW040a_D07_BE498878Td04P001A10P022H071R1_057.ab1   829 
  602    UCW039a_D07_BE498878Td04P001A10P022H071F1_057.ab1   602 
  614  C UCW040a_D07_BE498878Td04P001A10P022H071R1_057.ab1   813 
  630    UCW039a_D07_BE498878Td04P001A10P022H071F1_057.ab1   630 
  634  C UCW040a_D07_BE498878Td04P001A10P022H071R1_057.ab1   793 
  638    UCW039a_D07_BE498878Td04P001A10P022H071F1_057.ab1   638 
  646  C UCW040a_D07_BE498878Td04P001A10P022H071R1_057.ab1   781 
  654    UCW039a_D07_BE498878Td04P001A10P022H071F1_057.ab1   654 
  662  C UCW040a_D07_BE498878Td04P001A10P022H071R1_057.ab1   765 
  670    UCW039a_D07_BE498878Td04P001A10P022H071F1_057.ab1   670 
  674  C UCW040a_D07_BE498878Td04P001A10P022H071R1_057.ab1   753 
Contig length: old 1426, new 1426

Contig length: old 1426, new 1426
New start: 0