No. words: 1555; after pruning: 1529


Histogram of relative pair offsets, for read pairs with multiple alignments:
70     2
71     2
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.3 (1,1:1268)  280  0.00 0.00 0.00  UCW002F_F10_BE499257As02P002D06D121F1_079.ab1      485   770 (0)  C UCW002R_F10_BE499257As02P002D06D121R1_079.ab1   (0)   785   500 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  144 nodes

 74 str. conn. components

Path
    1    UCW002F_F10_BE499257As02P002D06D121F1_079.ab1     1 
  588  C UCW002R_F10_BE499257As02P002D06D121R1_079.ab1   682 
  596    UCW002F_F10_BE499257As02P002D06D121F1_079.ab1   596 
  620  C UCW002R_F10_BE499257As02P002D06D121R1_079.ab1   650 
  628    UCW002F_F10_BE499257As02P002D06D121F1_079.ab1   628 
  632  C UCW002R_F10_BE499257As02P002D06D121R1_079.ab1   638 
Contig length: old 1269, new 1269

Contig length: old 1269, new 1269
New start: 0