No. words: 1590; after pruning: 1550


Histogram of relative pair offsets, for read pairs with multiple alignments:
70     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.4 (1,1:1165)  411  0.47 0.00 0.00  UCW002F_C10_BE499257At01P002D06D121F1_070.ab1      363   786 (0)  C UCW002R_C10_BE499257At01P002D06D121R1_070.ab1   (0)   804   381 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1    UCW002F_C10_BE499257At01P002D06D121F1_070.ab1     1 
  602  C UCW002R_C10_BE499257At01P002D06D121R1_070.ab1   565 
  610    UCW002F_C10_BE499257At01P002D06D121F1_070.ab1   610 
  614  C UCW002R_C10_BE499257At01P002D06D121R1_070.ab1   553 
  630    UCW002F_C10_BE499257At01P002D06D121F1_070.ab1   630 
  634  C UCW002R_C10_BE499257At01P002D06D121R1_070.ab1   533 
Contig length: old 1166, new 1166

Contig length: old 1166, new 1166
New start: 0