No. words: 1657; after pruning: 1617


Histogram of relative pair offsets, for read pairs with multiple alignments:
69     2
70     6
99    12

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:1224)  414  0.46 0.23 0.00  UCW002F_D09_BE499257Ld04P002D06D121F1_074.ab1      435   865 (0)  C UCW002R_D09_BE499257Ld04P002D06D121R1_074.ab1   (0)   792   361 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1    UCW002F_D09_BE499257Ld04P002D06D121F1_074.ab1     1 
  614  C UCW002R_D09_BE499257Ld04P002D06D121R1_074.ab1   613 
Contig length: old 1225, new 1226

Contig length: old 1226, new 1226
New start: 0