No. words: 1531; after pruning: 1491


Histogram of relative pair offsets, for read pairs with multiple alignments:
70     2
71     2
99     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.8 (1,1:1256)  260  0.37 0.37 0.00  UCW002F_F09_BE499257Ld06P002D06D121F1_075.ab1      529   801 (0)  C UCW002R_F09_BE499257Ld06P002D06D121R1_075.ab1   (0)   730   457 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1    UCW002F_F09_BE499257Ld06P002D06D121F1_075.ab1     1 
  600  C UCW002R_F09_BE499257Ld06P002D06D121R1_075.ab1   659 
  604    UCW002F_F09_BE499257Ld06P002D06D121F1_075.ab1   604 
  644  C UCW002R_F09_BE499257Ld06P002D06D121R1_075.ab1   615 
  668    UCW002F_F09_BE499257Ld06P002D06D121F1_075.ab1   668 
  679  C UCW002R_F09_BE499257Ld06P002D06D121R1_075.ab1   579 
Contig length: old 1257, new 1257

Contig length: old 1257, new 1257
New start: 0