No. words: 1088; after pruning: 1062


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.9 (1,1:994)   87  1.08 0.00 0.00  UCW047_D08_BE499599Ta12P002H08P022A121F1_058.ab1      266   358 (0)  C UCW048_D08_BE499599Ta12P002H08P022A121R1_058.ab1   (0)   730   638 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  44 nodes

 24 str. conn. components

Path
    1    UCW047_D08_BE499599Ta12P002H08P022A121F1_058.ab1     1 
  309  C UCW048_D08_BE499599Ta12P002H08P022A121R1_058.ab1   687 
  324    UCW047_D08_BE499599Ta12P002H08P022A121F1_058.ab1   324 
  332  C UCW048_D08_BE499599Ta12P002H08P022A121R1_058.ab1   664 
Contig length: old 995, new 995

Contig length: old 995, new 995
New start: 0