No. words: 1418; after pruning: 1392


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:990)  405  0.93 0.00 0.23  UCW047_F08_BE499599Ta14P002H08P022A121F1_054.ab1      175   602 (0)  C UCW048_F08_BE499599Ta14P002H08P022A121R1_054.ab1   (0)   816   390 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  202 nodes

 103 str. conn. components

Path
    1    UCW047_F08_BE499599Ta14P002H08P022A121F1_054.ab1     1 
  378  C UCW048_F08_BE499599Ta14P002H08P022A121R1_054.ab1   614 
  402    UCW047_F08_BE499599Ta14P002H08P022A121F1_054.ab1   402 
  406  C UCW048_F08_BE499599Ta14P002H08P022A121R1_054.ab1   586 
Contig length: old 991, new 991

Contig length: old 991, new 991
New start: 0