No. words: 1648; after pruning: 1622


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:998)  644  0.00 0.00 0.00  UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1      191   839 (0)  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   (0)   809   161 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1     1 
  390  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   610 
  398    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1   398 
  406  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   594 
  410    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1   410 
  422  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   578 
  438    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1   438 
  442  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   558 
  446    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1   446 
  454  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   546 
  478    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1   478 
  490  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   510 
  578    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1   578 
  582  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   418 
  590    UCW047_F07_BE499599Td06P002H08P022A121F1_053.ab1   590 
  594  C UCW048_F07_BE499599Td06P002H08P022A121R1_053.ab1   406 
Contig length: old 999, new 999

Contig length: old 999, new 999
New start: 0